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wiki:autolit:extraction:export

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wiki:autolit:extraction:export [2024/08/02 14:55]
jthurnham [Exporting Documents and Data] 		wiki:autolit:extraction:export [2024/09/23 14:07] (current)
jthurnham [4. Add Columns]
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 Under Synthesis, click "Export" Under Synthesis, click "Export"
  
-{{ :undefined:customcer.png?nolink |}}+{{ :undefined:screenshot_2024-09-23_at_14.34.36.png?nolink |}}
  
 It should already be opened to Custom Tables; if you navigate away, click the "Custom Tables" toggle to return to this page. It should already be opened to Custom Tables; if you navigate away, click the "Custom Tables" toggle to return to this page.
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 ==== 2. Choose Type of Table ==== ==== 2. Choose Type of Table ====
  
-Click on the drop-down menu under "Table of" in order to choose whether you would like a table showing elements from the study as a whole, the various study arms in each study (placebo, intervention groups, etc.), or across all interventions.+Click on the drop-down menu under "Table of" in order to choose whether you would like a table showing elements from the study as a whole, the various study arms in each study (placebo, intervention groups, etc.), across all interventions or a tag frequency table.
  
 {{ :undefined:studyarm.png?nolink |}} {{ :undefined:studyarm.png?nolink |}}
  
-**Note** that if you want to be able to export/download any extracted data––to create tables for a manuscript, for example––you must select Table of "Study Arm."+Note: A Study Arm or Interventions table can only be generated if they were assigned during Meta-Analytical Extraction. Otherwise, selecting either of these will produce a blank table. Instead use a "Study" table and select the appropriate tags if data extraction was only performed in Tagging. 
 === Table of Studies === === Table of Studies ===
  
-Export a Table of Studies if you want one row per study, and **only if you do not plan to export Data Elements**. This is because the only Data Element that is scoped to the Study (rather than Study Arm) is total Study Size.+Export a Table of Studies if you want one row per study, and eextracted data from Tagging as individual columns (recommended for most constructed tables).
  
-To choose a Table of Studies, select "Study" in the drop-down, and proceed to Filters and Adding Columns. You will be able to choose among Bibliographic data, Tag data, or Study Size. This will create a table where each row (red box) represents a single study and each header (red arrow) is either a bibliographic attribute or a tag:+To choose a Table of Studies, select "Study" in the drop-down, and proceed to add Filters (tags or related reports) and Columns-- you will be able to choose among Bibliographic data, Tag data, or Study Size. You may also sort the order of listed studies by bibliographic data, MA extracted data or related report data. This will create a table where each row represents a single study and each header is either a bibliographic attribute or a tag:
  
-{{:wiki:autolit:extraction:screenshot_2022-05-25_121913.png}}+{{ :undefined:screenshot_2024-09-23_at_14.45.04.png?nolink |}}
  
 === Table of Study Arms === === Table of Study Arms ===
  
-Export a Table of Study Arms if you want each arm in each study to have its own row. This is the most similar table type to the Export All Data option below.+Export a Table of Study Arms if you have completed MA Extraction and want each arm in each study to have its own row. This is the most similar table type to the Export All Data option below.
  
-This is the most common export type for completing statistical analysis, since it is the **only table type that can list the exact data elements from the underlying studies.** It will create a table where each row is an arm (so a study, as shown by the boxes, may be split into multiple rows), and can have bibliographic, tag, or data element columns (arrows): {{:wiki:autolit:extraction:screenshot_2022-05-25_122318.png}}+This is the most common export type for completing statistical analysis, since it is the **only table type that can list the exact data elements from the underlying studies.** It will create a table where each row is an arm (so a study, as shown by the boxes, may be split into multiple rows in blue below), and can have bibliographic, tag, or data element columns (red) :  
 + 
 +{{ :undefined:screenshot_2024-09-23_at_14.47.15.png?nolink |}}
  
 === Table of Interventions === === Table of Interventions ===
  
-Export a Table of Interventions if you want to summarize all data at the level of Interventions. This is the most similar table type to the initial Summary view of Quantitative Synthesis.+Export a Table of Interventions if you have completed MA Extraction and want to summarize all data at the level of Interventions. This is the most similar table type to the initial Summary view of Quantitative Synthesis.
  
-This table type will have each Intervention in a row, and the only options for rows will be summaries of the Data Elements for each Intervention:+This table type will have each Intervention in a row (red) , and the only options for rows will be summaries of the Data Elements for each Intervention (blue) :
  
-{{:wiki:autolit:extraction:screenshot_2022-05-25_123153.png}}+{{ :undefined:screenshot_2024-09-23_at_14.49.39.png?nolink |}}
  
 === Table of Tags === === Table of Tags ===
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   * The Recursive Frequency of that tag, representing how commonly that tag OR any of its children were used   * The Recursive Frequency of that tag, representing how commonly that tag OR any of its children were used
  
-{{:wiki:autolit:extraction:screenshot_2022-05-25_122756.png}}+{{ :undefined:screenshot_2024-09-23_at_14.51.16.png?nolink |}}
  
  
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 If you want to export only the data from a subset of the studies in the nest, use the "Filter To" dropdown after selecting "Table of …". This will work differently based on the Table Type you selected above: If you want to export only the data from a subset of the studies in the nest, use the "Filter To" dropdown after selecting "Table of …". This will work differently based on the Table Type you selected above:
  
-  * In **Tables of Studies**, you can filter to studies that have a Tag at or below a certain level. +  * In **Tables of Studies**, you can filter to studies that have a Tag at or below a certain level, studies in a specific related report family, or studies that are primary or secondary. 
-  * In **Tables of Study Arms**, you can filter to study arms that have a certain Intervention, a certain Data Element collected for them, or that have a specific Tag at or below a certain level on the corresponding study.+  * In **Tables of Study Arms**, you can filter to study arms that have a Tag at or below a certain level, related report family or type, has certain Intervention, or a certain Data Element collected for them.
   * In **Tables of Interventions**, you can filter to studies that have a specific Intervention.   * In **Tables of Interventions**, you can filter to studies that have a specific Intervention.
   * In **Tables of Tags**, you can filter to studies that have a Tag at or below a certain level.   * In **Tables of Tags**, you can filter to studies that have a Tag at or below a certain level.
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       * Related Report Families can be identified as one of the pieces of Bibliographic data, with either the custom name or Author, Year of the Primary report.       * Related Report Families can be identified as one of the pieces of Bibliographic data, with either the custom name or Author, Year of the Primary report.
       * To add all citation information in one cell, select "Citation" from the Attribute drop-down. All citations or references in Nested Knowledge are presented in [[https://guides.med.ucf.edu/jama|(JAMA format)]].       * To add all citation information in one cell, select "Citation" from the Attribute drop-down. All citations or references in Nested Knowledge are presented in [[https://guides.med.ucf.edu/jama|(JAMA format)]].
-  * **Tag:**  The tag names and tag text excerpts at or below a given tag.+ 
 +  * **Meta-Analytical Extraction:** Study Size: The total number of patients in a Study. 
 +  * **Arm Data:** includes Intervention and Arm Size (MA Extraction only) 
 +  * **Tag:**  The tag names and tag text excerpts at or below a given tag or exact tag.
   * **Intervention:**  The Intervention applied to an entire cohort or to a Study Arm.   * **Intervention:**  The Intervention applied to an entire cohort or to a Study Arm.
-  * **Study/Arm Size:**  The total number of patients in a Study or an Arm. +  * **Study/Arm Size:**  The total number of patients in a Study. 
-  * **Data Element:**  The exact quantitative data associated with a given Study Arm or cohort. Note: Categorical Data Elements cannot be exported in this table structure due to their large column sizes. +  * **Data Element:**  The exact quantitative data associated with a given Study Arm or cohort. Note: Categorical Data Elements cannot be exported in this table structure due to their large column sizes (MA Extraction only) 
-{{:wiki:autolit:extraction:img40.png?nolink&  }}+  * **Tag MetaData:** Add the name, description, depth, and data element type. 
 +  * **Tag Statistics:** Add Exact and/or Recursive Frequency.
  
-{{  https://wiki.nested-knowledge.com//home/ubuntu/nkwiki/dokuwiki/lib/plugins/ckgedit/fckeditor/userfiles/image/wiki/autolit/screenshot2021-10-11at5.11.52pm.png?nolink&  }}+{{ :undefined:screenshot_2024-09-23_at_15.05.59.png?nolink |}}
  
 === Including Tag Tables === === Including Tag Tables ===
wiki/autolit/extraction/export.1722610557.txt.gz · Last modified: 2024/08/02 14:55 by jthurnham

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