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wiki:autolit:extraction:configure

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wiki:autolit:extraction:configure [2023/01/24 00:28]
kevinkallmes [How many Data Elements should you create?] 		wiki:autolit:extraction:configure [2023/06/27 21:40]
jthurnham removed
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 ==== Where does Extraction Configuration take place? ==== ==== Where does Extraction Configuration take place? ====
  
-{{:wiki:autolit:extraction:img45.png?nolink&  }}+Extraction can be configured "Configure Extraction" in the Extraction module. //Note:// this page is the same as the "Configure Tagging" page, but with the extraction section automatically open. 
  
-Extraction can be configured in two places: in the same location that Tags are configured or under "Configure Extraction" in the Extraction module. Extraction configuration is integrated into tagging configuration in order to use your existing hierarchy to structure your Interventions and Data Elements.+Extraction configuration is integrated into tagging configuration in order to use your existing hierarchy to structure your Interventions and Data Elements.
  
 +{{ :wiki:autolit:extraction:ex.png?nolink |}}
 ===== Configuring Interventions ===== ===== Configuring Interventions =====
  
 ==== 1. Open the Extraction Configuration panel ==== ==== 1. Open the Extraction Configuration panel ====
  
-Expand the "Extraction Configuration" dropdown button on the right.+If it isn't already, expand the "Extraction Configuration" dropdown button on the right.
  
-{{:wiki:autolit:extraction:img46.png?nolink&  }}+{{ :wiki:autolit:extraction:ex2.png?nolink |}}
  
 ==== 2. Toggle to Interventions ==== ==== 2. Toggle to Interventions ====
  
-{{:wiki:autolit:extraction:img47.png?nolink&  }}+{{ :wiki:autolit:extraction:inter.png?nolink |}}
  
 ---- ----
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 The Intervention list on the right corresponds to all of the tags underneath the "Intervention" root tag The Intervention list on the right corresponds to all of the tags underneath the "Intervention" root tag
  
-{{:wiki:autolit:extraction:img48.png?nolink&  }}+{{ :wiki:autolit:extraction:inter2.png?nolink |}}
  
-**//Intervention tags can easily be changed. For example, by simply opening the Interventions tab and clicking "Endpoints", all tags under "Endpoints" are now Interventions for your Extraction.// **+**//Intervention tags can easily be changed. For example, by simply opening the Interventions tab and clicking "Implants", all tags under "Implants" are now Interventions for your Extraction.// **
  
-{{:wiki:autolit:extraction:img49.png?nolink&  }}+{{ :wiki:autolit:extraction:inter3.png?nolink |}}
  
-**//This is important to note because if you accidentally leave the incorrect hierarchy as the Interventions and then you go to extract, these incorrect Interventions options (for instance, "Endpoints" tags in the example above) will appear under the Intervention drop-down menu instead of the "Interventions" tags// **+**//This is important to note because if you accidentally leave the incorrect hierarchy as the Interventions and then you go to extract, these incorrect Interventions options (for instance, "Implants" tags in the example above) will appear under the Intervention drop-down menu instead of the "Interventions" tags// **
  
-{{:wiki:autolit:extraction:img50.png?nolink&  }}+{{ :wiki:autolit:extraction:inter4.png?nolink |}}
  
 **//Luckily, this is easily fixed: just navigate back to the Data Elements Menu within the Tagging Hierarchy, click on the "Interventions" root tag, and viola, your Interventions are Interventions once again!// ** **//Luckily, this is easily fixed: just navigate back to the Data Elements Menu within the Tagging Hierarchy, click on the "Interventions" root tag, and viola, your Interventions are Interventions once again!// **
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 Navigate to the Data Elements Menu and click "Data Elements" Navigate to the Data Elements Menu and click "Data Elements"
  
-{{:wiki:autolit:extraction:img51.png?nolink&  }}+{{ :wiki:autolit:extraction:de.png?nolink |}}
  
 **//The data elements tab will show you a list of all tags, which you can select either in the list or by clicking on the tag node.//** **//The data elements tab will show you a list of all tags, which you can select either in the list or by clicking on the tag node.//**
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 Click the plus sign next to a tag to turn the tag into a Data Element Click the plus sign next to a tag to turn the tag into a Data Element
  
-{{:wiki:autolit:extraction:img52.png?nolink&  }} +{{ :wiki:autolit:extraction:de2.png?nolink |}}
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 Continuous, Dichotomous, or Categorical (Mandatory) Continuous, Dichotomous, or Categorical (Mandatory)
  
-{{:wiki:autolit:extraction:img53.png?nolink&  }}+{{ :wiki:autolit:extraction:de3.png?nolink |}}
  
 **//Depending on the data type, different inputs will populate. For example, if a data element is categorical, you will be able to specify the different categories. // ** **//Depending on the data type, different inputs will populate. For example, if a data element is categorical, you will be able to specify the different categories. // **
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 Baseline or Outcome - Choose the Expected Timepoint based on whether the data was collected at Baseline or as an Outcome (Mandatory) Baseline or Outcome - Choose the Expected Timepoint based on whether the data was collected at Baseline or as an Outcome (Mandatory)
  
-{{:wiki:autolit:extraction:img54.png?nolink&  }}+{{ :wiki:autolit:extraction:de4.png?nolink |}}
  
 **//If the data element can be both a Baseline and an Outcome, choose Baseline.// ** **//If the data element can be both a Baseline and an Outcome, choose Baseline.// **
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 Higher Better or Lower Better (if applicable) - For example, the Data Element is "Mortality", Lower Better would most likely be appropriate Higher Better or Lower Better (if applicable) - For example, the Data Element is "Mortality", Lower Better would most likely be appropriate
  
-{{:wiki:autolit:extraction:img55.png?nolink&  }}+{{ :wiki:autolit:extraction:de5.png?nolink |}}
  
 ---- ----
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 Example: Mintues, mL, kg (if applicable) Example: Mintues, mL, kg (if applicable)
  
-{{:wiki:autolit:extraction:img56.png?nolink&  }}+{{ :wiki:autolit:extraction:de6.png?nolink |}}
  
 ---- ----
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 Mean or Median (Mandatory for continuous variables) - After choosing Mean or Median, it will also ask you about "Dispersion Measure" (SD for Mean; IQR or Range for Median) Mean or Median (Mandatory for continuous variables) - After choosing Mean or Median, it will also ask you about "Dispersion Measure" (SD for Mean; IQR or Range for Median)
  
-{{:wiki:autolit:extraction:img57.png?nolink&  }} +{{ :wiki:autolit:extraction:de7.png?nolink |}}
 ---- ----
  

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