Nested Knowledge

Familiarize yourself with the following techniques to optimize your search strategy and efficiently capture all relevant articles. A well-designed search term is one that maximizes the proportion of retrieved articles that are relevant to your particular project while minimizing the number of relevant articles that are not captured by the search.

PubMed uses the Boolean operators “AND”, “OR”, and “NOT” to link elements in a search term.

• The search term “Atrial fibrillation AND stroke risk” will only return articles associated with both the first element (atrial fibrillation) and the second element (stroke risk).
• The search term “Atrial fibrillation OR stroke risk” will return any article associated with either the first element (atrial fibrillation) or the second element (stroke risk). Therefore, this search will return more articles than the search term in the first bullet.

• The search term “Atrial fibrillation NOT paroxysmal” will return articles associated with the first element (atrial fibrillation), but will not return articles associated with the second element (paroxysmal); i.e., this search should have a lower likelihood of capturing articles about paroxysmal atrial fibrillation, and a higher likelihood of retrieving articles about persistent and long-term persistent atrial fibrillation.

Tip: Use parentheses to stack booleans for even more precise searches. For example, “(Atrial fibrillation NOT paroxysmal) AND stroke risk”.

Adding quotation marks (“ ”) around elements in a search term will ensure that PubMed only returns articles that contain the exact phrase in quotations. Therefore, of the following two searches, the second will produce fewer results.

• CFTR gene AND cystic fibrosis

• “CFTR gene” AND cystic fibrosis

Tip: This is a useful tool to “weed out” irrelevant results, but researchers should be cautious. If there are multiple synonyms or variations used to describe the same disease state, outcome, or intervention, it is wise to avoid quotation marks so that the search not does not exclude potentially relevant articles.

Adding an asterisk (*) at the end of an element in your search term can help expand what PubMed shows you. In this case, PubMed will search for all words that have the same root leading up to the asterisk, regardless of how the word ends.

• The search “monozygotic twin AND embryo development” returns 377 results. This search is only identifying records associated with each element in the search term.

• However, the search “monozygotic twin AND embryo develop*” returns 452 results, since this search also includes “embryo developmental”, “embryo developing”, “embryo developed”, etc.

NK software can filter articles by language if the search is performed in-platform; however, if the search is being performed directly in PubMed, you can filter for English or other language articles by including (language[Filter]) in the search term. For example, you could search:

• “Total hip arthroplasty” AND (english[Filter])

NK software can also filter articles by publication date if the search is performed in-platform; however, if the search is being performed directly in PubMed, you can filter for articles published within certain dates by including (Year1:Year2[pdat]) in the search term. For example, you could search:

• Total hip arthroplasty AND bikini incision AND (2010:2022[pdat])

You can filter for articles published with certain study designs by including (studydesign[Filter]) in the search term. For example, you could search:

• Total hip arthroplasty AND (clinicalstudy[Filter])

Tip: You can include a long string of elegible study types by linking them with Boolean operators and parentheses. For example, you could search “Total hip arthroplasty AND (clinicalstudy[Filter] OR clinicaltrial[Filter] OR comparativestudy[Filter] OR controlledclinicaltrial[Filter] OR randomizedcontrolledtrial[Filter])”.

When performing searches in PubMed, you can add [MeSH] after an item in the search term to retrieve articles associated with the indicated search term. For example, this could be written as:

• Knee joint[MeSH] AND arthritis

This strategy will identify articles related to the MeSH term that may not be retrieved without adding [MeSH], and may also eliminate articles from the search that are unrelated to the MeSH term.

Tip: MeSH stands for Medical Subject Headings and is an indexing feature to facilitate article identification. More information about MeSH keywords can be found here.

A thorough search will include both British and American spellings. You will want to search for “randomized” trials and “randomised” trials. You will want to look at “pediatric” populations and “paediatric” populations. Here is a guide that compares British and American spellings: 9 Spelling Differences Between British and American English

— Alex Mebane 2021/10/05 21:51—